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1

Physical Activity, Television Viewing Time, and DNA Methylation in Peripheral Blood

VAN ROEKEL, ELINE H., DUGUÃ, PIERRE-ANTOINE, JUNG, CHOL-HEE, JOO, JIHOON E., MAKALIC, ENES, WONG, EE MING, ENGLISH, DALLAS R., SOUTHEY, MELISSA C., GILES, GRAHAM G., LYNCH, BRIGID M., MILNE, ROGER L.

Journal:

Medicine & Science in Sports & Exercise

Year:

2019

Language:

english

File:

PDF, 372 KB

english, 2019

2

Overall lack of replication of associations between dietary intake of folate and vitamin B-12 and DNA methylation in peripheral blood

Dugué, Pierre-Antoine, Chamberlain, James A, Bassett, Julie K, Hodge, Allison M, Brinkman, Maree T, Joo, JiHoon E, Jung, Chol-Hee, Wong, Ee Ming, Makalic, Enes, Schmidt, Daniel F, Hopper, John L, Buch

Journal:

American Journal of Clinical Nutrition

Year:

2020

File:

PDF, 123 KB

2020

3

DNA methylation-based biological aging and cancer risk and survival: Pooled analysis of seven prospective studies

Dugué, Pierre-Antoine, Bassett, Julie K, Joo, JiHoon E, Jung, Chol-Hee, Wong, Ee Ming, Moreno-Betancur, Margarita, Schmidt, Daniel, Makalic, Enes, Li, Shuai, Severi, Gianluca, Hodge, Allison M, Buchan

Journal:

International Journal of Cancer

Year:

2017

Language:

english

File:

PDF, 2.35 MB

english, 2017

4

An open-source, integrated pedigree data management and visualization tool for genetic epidemiology

Ranaweera, Thilina, Makalic, Enes, Hopper, John L, Bickerstaffe, Adrian

Journal:

International Journal of Epidemiology

Year:

2018

Language:

english

File:

PDF, 387 KB

english, 2018

5

Ability of known susceptibility SNPs to predict colorectal cancer risk for persons with and without a family history

Jenkins, Mark A., Win, Aung K., Dowty, James G., MacInnis, Robert J., Makalic, Enes, Schmidt, Daniel F., Dite, Gillian S., Kapuscinski, Mirosl, Clendenning, Mark, Rosty, Christophe, Winship, Ingrid M.

Journal:

Familial Cancer

Year:

2019

Language:

english

File:

PDF, 884 KB

english, 2019

6

An efficient algorithm for sampling from sin k â( x ) for generating random correlation matrices

Makalic, Enes, Schmidt, Daniel F.

Journal:

Communications in Statistics - Simulation and Computation

Year:

2020

File:

PDF, 887 KB

2020

7

Variants in the VEGFA Gene and Treatment Outcome after Anti-VEGF Treatment for Neovascular Age-related Macular Degeneration

Abedi, Farshad, Wickremasinghe, Sanjeewa, Richardson, Andrea J., Makalic, Enes, Schmidt, Daniel F., Sandhu, Sukhpal S., Baird, Paul N., Guymer, Robyn H.

Journal:

Year:

2013

Language:

english

File:

PDF, 344 KB

english, 2013

8

Strategies for Integrated Analysis of Genetic, Epigenetic, and Gene Expression Variation in Cancer: Addressing the Challenges

Thingholm, Louise B., Andersen, Lars, Makalic, Enes, Southey, Melissa C., Thomassen, Mads, Hansen, Lise Lotte

Journal:

Frontiers in Genetics

Year:

2016

Language:

english

File:

PDF, 518 KB

english, 2016

9

Association of DNA Methylation-Based Biological Age with Health Risk Factors, and Overall and Cause-Specific Mortality

Dugué, Pierre-Antoine, Bassett, Julie K., Joo, JiHoon E., Baglietto, Laura, Jung, Chol-Hee, Ming Wong, Ee, Fiorito, Giovanni, Schmidt, Daniel, Makalic, Enes, Li, Shuai, Moreno-Betancur, Margarita, Buc

Journal:

American Journal of Epidemiology

Year:

2017

Language:

english

File:

PDF, 697 KB

english, 2017

10

Minimum message length inference of the Poisson and geometric models using heavy-tailed prior distributions

Wong, Chi Kuen, Makalic, Enes, Schmidt, Daniel F.

Journal:

Journal of Mathematical Psychology

Year:

2018

Language:

english

File:

PDF, 652 KB

english, 2018

11

[IEEE 2008 International Conference on Intelligent Sensors, Sensor Networks and Information Processing (ISSNIP) - Sydney, Australia (2008.12.15-2008.12.18)] 2008 International Conference on Intelligent Sensors, Sensor Networks and Information Processing - Combining probabilistic reference resolution with simulated vision

Zukerman, Ingrid, Makalic, Enes, Niemann, Michael

Year:

2008

Language:

english

File:

PDF, 151 KB

english, 2008

12

[Academic Press Library in Signal Processing] Academic Press Library in Signal Processing: Volume 1 - Signal Processing Theory and Machine Learning Volume 1 || A Tutorial on Model Selection

Year:

2014

Language:

english

File:

PDF, 331 KB

english, 2014

13

Minimum message length analysis of multiple short time series

Schmidt, Daniel F., Makalic, Enes

Journal:

Statistics & Probability Letters

Year:

2015

Language:

english

File:

PDF, 377 KB

english, 2015

14

Minimum Message Length shrinkage estimation

Enes Makalic, Daniel F. Schmidt

Journal:

Statistics & Probability Letters

Year:

2009

Language:

english

File:

PDF, 434 KB

english, 2009

15

Global measures of peripheral blood-derived DNA methylation as a risk factor in the development of mature B-cell neoplasms

Wong Doo, Nicole, Makalic, Enes, Joo, JiHoon E, Vajdic, Claire M, Schmidt, Daniel F, Wong, Ee Ming, Jung, Chol-Hee, Severi, Gianluca, Park, Daniel J, Chung, Jessica, Baglietto, Laura, Prince, Henry Mi

Journal:

Year:

2015

Language:

english

File:

PDF, 880 KB

english, 2015

16

Quantifying the utility of single nucleotide polymorphisms to guide colorectal cancer screening

Jenkins, Mark A, Makalic, Enes, Dowty, James G, Schmidt, Daniel F, Dite, Gillian S, MacInnis, Robert J, Ait Ouakrim, Driss, Clendenning, Mark, Flander, Louisa B, Stanesby, Oliver K, Hopper, John L, Wi

Journal:

Future Oncology

Year:

2016

Language:

english

File:

PDF, 2.00 MB

english, 2016

17

Smoking and blood DNA methylation: an epigenome-wide association study and assessment of reversibility

Dugué, Pierre-Antoine, Jung, Chol-Hee, Joo, Jihoon E, Wang, Xiaochuan, Wong, Ee Ming, Makalic, Enes, Schmidt, Daniel F, Baglietto, Laura, Severi, Gianluca, Southey, Melissa C, English, Dallas R, Giles

Journal:

Year:

2019

Language:

english

File:

PDF, 2.44 MB

english, 2019

18

Alcohol consumption is associated with widespread changes in blood DNA methylation: Analysis of cross‐sectional and longitudinal data

Dugué, Pierre‐Antoine, Wilson, Rory, Lehne, Benjamin, Jayasekara, Harindra, Wang, Xiaochuan, Jung, Chol‐Hee, Joo, JiHoon E., Makalic, Enes, Schmidt, Daniel F., Baglietto, Laura, Severi, Gianluca, Gieg

Journal:

Addiction Biology

Year:

2019

File:

PDF, 296 KB

2019

19

Variables impacting on the outcomes after liver transplantation for hepatocellular cancer within UCSF criteria

Lee, Eunice, Fink, Michael, Perini, Marcos, Starkey, Graham, Wang, Bao-Zhong, Oniscu, Gabriel, Makalic, Enes, Christophi, Christopher, Jones, Robert

Journal:

Year:

2019

File:

PDF, 40 KB

2019

20

Cirrus: An Automated Mammography-Based Measure of Breast Cancer Risk Based on Textural Features

Schmidt, Daniel F, Makalic, Enes, Goudey, Benjamin, Dite, Gillian S, Stone, Jennifer, Nguyen, Tuong L, Dowty, James G, Baglietto, Laura, Southey, Melissa C, Maskarinec, Gertraud, Giles, Graham G, Hopp

Journal:

JNCI Cancer Spectrum

Year:

2018

File:

PDF, 775 KB

2018

21

Tumour morphology of early-onset breast cancers predicts breast cancer risk for first-degree relatives: the Australian Breast Cancer Family Registry

Gillian S Dite, Enes Makalic, Daniel F Schmidt, Graham G Giles, John L Hopper, Melissa C Southey

Journal:

Breast Cancer Research

Year:

2012

Language:

english

File:

PDF, 271 KB

english, 2012

22

Estimation of stationary autoregressive models with the Bayesian LASSO

Schmidt, Daniel F., Makalic, Enes

Journal:

Journal of Time Series Analysis

Year:

2013

Language:

english

File:

PDF, 1.25 MB

english, 2013

23

A Simple Sampler for the Horseshoe Estimator

Makalic, Enes, Schmidt, Daniel F.

Journal:

IEEE Signal Processing Letters

Year:

2016

Language:

english

File:

PDF, 684 KB

english, 2016

24

Heritable methylation marks associated with breast and prostate cancer risk

Dugué, Pierre-Antoine, Dowty, James G., Joo, Jihoon E., Wong, Ee M., Makalic, Enes, Schmidt, Daniel F., English, Dallas R., Hopper, John L., Pedersen, John, Severi, Gianluca, MacInnis, Robert J., Miln

Journal:

Year:

2018

Language:

english

File:

PDF, 1.74 MB

english, 2018

25

FAN1variants identified in multiple-case early-onset breast cancer families via exome sequencing: no evidence for association with risk for breast cancer

Daniel J. Park, Fabrice A. Odefrey, Fleur Hammet, Graham G. Giles, Laura Baglietto, ABCFS, MCCS, John L. Hopper, Daniel F. Schmidt, Enes Makalic, Olga M. Sinilnikova, David E. Goldgar, Melissa C. Sout

Journal:

Breast Cancer Research and Treatment

Year:

2011

Language:

english

File:

PDF, 252 KB

english, 2011

26

Novel mammogramâbased measures improve breast cancer risk prediction beyond an established mammographic density measure

Nguyen, Tuong L., Schmidt, Daniel F., Makalic, Enes, Maskarinec, Gertraud, Li, Shuai, Dite, Gillian S., Aung, Ye K., Evans, Christopher F., Trinh, Ho N., Baglietto, Laura, Stone, Jennifer, Song, Yunâ

Journal:

International Journal of Cancer

Year:

2020

File:

PDF, 1001 KB

2020

27

Dietary intake of one-carbon metabolism nutrients and DNA methylation in peripheral blood

Chamberlain, James A, Dugué, Pierre-Antoine, Bassett, Julie K, Hodge, Allison M, Brinkman, Maree T, Joo, JiHoon E, Jung, Chol-Hee, Makalic, Enes, F Schmidt, Daniel, Hopper, John L, Buchanan, Daniel D,

Journal:

American Journal of Clinical Nutrition

Year:

2018

Language:

english

File:

PDF, 780 KB

english, 2018

28

Smoking and blood DNA methylation: an epigenome-wide association study and assessment of reversibility

Dugué, Pierre-Antoine, Jung, Chol-Hee, Joo, Jihoon E, Wang, Xiaochuan, Wong, Ee Ming, Makalic, Enes, Schmidt, Daniel F, Baglietto, Laura, Severi, Gianluca, Southey, Melissa C, English, Dallas R, Giles

Journal:

Year:

2019

File:

PDF, 2.44 MB

2019

29

Quantifying the cumulative effect of low-penetrance genetic variants on breast cancer risk

Smyth, Conor, Špakulová, Iva, Cotton-Barratt, Owen, Rafiq, Sajjad, Tapper, William, Upstill-Goddard, Rosanna, Hopper, John L., Makalic, Enes, Schmidt, Daniel F., Kapuscinski, Miroslav, Fliege, Jörg, C

Journal:

Molecular Genetics & Genomic Medicine

Year:

2015

Language:

english

File:

PDF, 351 KB

english, 2015

30

Estimation of stationary autoregressive models with the Bayesian LASSO

Schmidt, Daniel F., Makalic, Enes

Journal:

Journal of Time Series Analysis

Year:

2013

Language:

english

File:

PDF, 1.25 MB

english, 2013

31

Genome-Wide Measures of Peripheral Blood Dna Methylation and Prostate Cancer Risk in a Prospective Nested Case-Control Study

FitzGerald, Liesel M., Naeem, Haroon, Makalic, Enes, Schmidt, Daniel F., Dowty, James G., Joo, Jihoon E., Jung, Chol-Hee, Bassett, Julie K., Dugue, Pierre-Antoine, Chung, Jessica, Lonie, Andrew, Milne

Journal:

Year:

2017

Language:

english

File:

PDF, 87 KB

english, 2017

32

Genome-wide measures of DNA methylation in peripheral blood and the risk of urothelial cell carcinoma: a prospective nested case–control study

Dugué, Pierre-Antoine, Brinkman, Maree T, Milne, Roger L, Wong, Ee Ming, FitzGerald, Liesel M, Bassett, Julie K, Joo, Jihoon E, Jung, Chol-Hee, Makalic, Enes, Schmidt, Daniel F, Park, Daniel J, Chung,

Journal:

British Journal of Cancer

Year:

2016

Language:

english

File:

PDF, 241 KB

english, 2016

33

Going Beyond Conventional Mammographic Density to Discover Novel Mammogram-Based Predictors of Breast Cancer Risk

Hopper, John L, Nguyen, Tuong L, Schmidt, Daniel F, Makalic, Enes, Song, Yun-Mi, Sung, Joohon, Dite, Gillian S, Dowty, James G, Li, Shuai

Journal:

Journal of Clinical Medicine

Year:

2020

File:

PDF, 740 KB

2020

34

Stochastic epigenetic mutations are associated with risk of breast cancer, lung cancer and mature B-cell neoplasms

Gagliardi, Amedeo, DuguÃ©, Pierre-Antoine, NÃ¸st, Therese Haugdahl, Southey, Melissa C., Buchanan, Daniel D., Schmidt, Daniel F., Makalic, Enes, Hodge, Allison M, English, Dallas R., Wong Doo, Nicole,

Journal:

Cancer Epidemiology Biomarkers & Prevention

Year:

2020

File:

PDF, 1.59 MB

2020

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